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1

Phoenix phylogeny, and analysis of genetic variation in a diverse collection of date palm (Phoenix dactylifera) and related species

Chaluvadi, Srinivasa R., Young, Porter, Thompson, Kentrez, Bahri, Bochra Amina, Gajera, Bhavesh, Narayanan, Subhash, Krueger, Robert, Bennetzen, Jeffrey L.

Journal:

Plant Diversity

Year:

2018

Language:

english

File:

PDF, 16.04 MB

english, 2018

2

The Contributions of Transposable Elements to the Structure, Function, and Evolution of Plant Genomes

Bennetzen, Jeffrey L., Wang, Hao

Journal:

Annual Review of Plant Biology

Year:

2014

Language:

english

File:

PDF, 941 KB

english, 2014

3

5Gs for crop genetic improvement

Varshney, Rajeev K, Sinha, Pallavi, Singh, Vikas K, Kumar, Arvind, Zhang, Qifa, Bennetzen, Jeffrey L

Journal:

Current Opinion in Plant Biology

Year:

2020

Language:

english

File:

PDF, 392 KB

english, 2020

4

Grass Genomic Synteny Illuminates Plant Genome Function and Evolution

Jeffrey L. Bennetzen, Mingsheng Chen

Journal:

Year:

2008

Language:

english

File:

PDF, 333 KB

english, 2008

5

The genetic map of finger millet,Eleusine coracana

Mathews M. Dida, Srinivasachary, Sujatha Ramakrishnan, Jeffrey L. Bennetzen, Mike D. Gale, Katrien M. Devos

Journal:

Theoretical and Applied Genetics

Year:

2007

Language:

english

File:

PDF, 504 KB

english, 2007

6

Encyclopedia of Life Sciences || Plant Synteny, Colinearity and Genome Evolution

Bennetzen, Jeffrey L

Year:

2001

Language:

english

File:

PDF, 155 KB

english, 2001

7

Comparison of DNA Marker Technologies in Characterizing Plant Genome Diversity: Variability in Chinese Sorghums

Yang, Wenpeng, Oliveira, Antonio C., Godwin, Ian, Schertz, Keith, Bennetzen, Jeffrey L.

Journal:

Year:

1996

File:

PDF, 162 KB

1996

8

Transposable elements, gene creation and genome rearrangement in flowering plants

Jeffrey L Bennetzen

Journal:

Current Opinion in Genetics & Development

Year:

2005

Language:

english

File:

PDF, 208 KB

english, 2005

9

Mechanisms and rates of genome expansion and contraction in flowering plants

Jeffrey L. Bennetzen

Journal:

Year:

2002

Language:

english

File:

PDF, 85 KB

english, 2002

10

[Compendium of Plant Genomes] The Maize Genome || Endophytes: The Other Maize Genome

Bennetzen, Jeffrey, Flint-Garcia, Sherry, Hirsch, Candice, Tuberosa, Roberto

Year:

2018

Language:

english

File:

PDF, 877 KB

english, 2018

11

Genetic Diversity and Population Structure of Native and Introduced Date Palm (Phoenix dactylifera) Germplasm in the United Arab Emirates

Chaluvadi, Srinivasa R., Khanam, Sakina, Aly, Mohammed A. M., Bennetzen, Jeffrey L.

Journal:

Tropical Plant Biology

Year:

2014

Language:

english

File:

PDF, 579 KB

english, 2014

12

Population Structure and Diversity in Finger Millet (Eleusine coracana) Germplasm

Mathews M. Dida, Nelson Wanyera, Melanie L. Harrison Dunn, Jeffrey L. Bennetzen, Katrien M. Devos

Journal:

Tropical Plant Biology

Year:

2008

Language:

english

File:

PDF, 236 KB

english, 2008

13

[Compendium of Plant Genomes] The Maize Genome || Genomics of Fungal Disease Resistance

Bennetzen, Jeffrey, Flint-Garcia, Sherry, Hirsch, Candice, Tuberosa, Roberto

Year:

2018

Language:

english

File:

PDF, 203 KB

english, 2018

14

Relationships Between Gene Structure and Genome Instability in Flowering Plants

Bennetzen, Jeffrey L., Wang, Xuewen

Journal:

Molecular Plant

Year:

2018

Language:

english

File:

PDF, 708 KB

english, 2018

15

Brachypodium distachyon and Setaria viridis : Model Genetic Systems for the Grasses

Brutnell, Thomas P., Bennetzen, Jeffrey L., Vogel, John P.

Journal:

Annual Review of Plant Biology

Year:

2015

Language:

english

File:

PDF, 2.31 MB

english, 2015

16

Reference genome sequence of the model plant Setaria

Bennetzen, Jeffrey L, Schmutz, Jeremy, Wang, Hao, Percifield, Ryan, Hawkins, Jennifer, Pontaroli, Ana C, Estep, Matt, Feng, Liang, Vaughn, Justin N, Grimwood, Jane, Jenkins, Jerry, Barry, Kerrie, Lind

Journal:

Nature Biotechnology

Year:

2012

Language:

english

File:

PDF, 1.02 MB

english, 2012

17

Draft Genome Sequence of a Serratia marcescens Strain Isolated from the Pitcher Fluids of a Sarracenia Pitcher Plant

Zhang, Shumeng, Chaluvadi, Srinivasa R., Bennetzen, Jeffrey L., Baltrus, David A.

Journal:

Microbiology Resource Announcements

Year:

2020

File:

PDF, 701 KB

2020

18

Genome Sequence Analysis of Enterobacter sp. C6, Found in the Pitcher Fluids of Sarracenia rosea

Zhang, Shumeng, Chaluvadi, Srinivasa R., Bennetzen, Jeffrey L., Putonti, Catherine

Journal:

Microbiology Resource Announcements

Year:

2020

File:

PDF, 116 KB

2020

19

Epigenetics of the epigenome

Jeffrey L Bennetzen, Jian-Kang Zhu

Journal:

Current Opinion in Plant Biology

Year:

2011

Language:

english

File:

PDF, 93 KB

english, 2011

20

Plant Retrotransposons

Kumar, Amar, Bennetzen, Jeffrey L.

Journal:

Annual Review of Genetics

Year:

1999

Language:

english

File:

PDF, 2.03 MB

english, 1999

21

A unified classification system for eukaryotic transposable elements

Wicker, Thomas, Sabot, François, Hua-Van, Aurélie, Bennetzen, Jeffrey L., Capy, Pierre, Chalhoub, Boulos, Flavell, Andrew, Leroy, Philippe, Morgante, Michele, Panaud, Olivier

Journal:

Nature Reviews Genetics

Year:

2007

Language:

english

File:

PDF, 596 KB

english, 2007

22

Transposable element origins of epigenetic gene regulation

Damon Lisch, Jeffrey L Bennetzen

Journal:

Current Opinion in Plant Biology

Year:

2011

Language:

english

File:

PDF, 146 KB

english, 2011

23

The structure and evolution of angiosperm nuclear genomes

Jeffrey L. Bennetzen

Journal:

Current Opinion in Plant Biology

Year:

1998

Language:

english

File:

PDF, 840 KB

english, 1998

24

Recurrent Loss of Specific Introns during Angiosperm Evolution

Wang, Hao, Devos, Katrien M., Bennetzen, Jeffrey L., Feschotte, Cédric

Journal:

Year:

2014

Language:

english

File:

PDF, 603 KB

english, 2014

25

Handbook of Maize || Mutator and MULE transposons

Bennetzen, Jeffrey L., Hake, Sarah

Year:

2009

Language:

english

File:

PDF, 1.86 MB

english, 2009

26

Integration and Nonrandom Mutation of a Plasma Membrane Proton ATPase Gene Fragment within the Bs1 Retroelement of Maize

Young-Kwan Jin and Jeffrey L. Bennetzen

Journal:

Year:

1994

Language:

english

File:

PDF, 1.55 MB

english, 1994

27

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 – 31 May 2010

Molecular Ecology Resources Primer Development Consortium, K. ANDREE, JAN AXTNER, M. J. BAGLEY, E. J. BARLOW, T. J. C. BEEBEE, JEFFREY L. BENNETZEN, ELDREDGE BERMINGHAM, M. C. BOISSELIER-DUBAYLE, CHRI

Journal:

Molecular Ecology Resources

Year:

2010

Language:

english

File:

PDF, 111 KB

english, 2010

28

Variation in allelic expression associated with a recombination hotspot in Zea mays

Hawkins, Jennifer S., Delgado, Vivian, Feng, Liang, Carlise, Michael, Dooner, Hugo K., Bennetzen, Jeffrey L.

Journal:

The Plant Journal

Year:

2014

Language:

english

File:

PDF, 440 KB

english, 2014

29

Covalent DNA modification and the regulation ofMutatorelement transposition in maize

Jeffrey L. Bennetzen

Journal:

Molecular Genetics and Genomics

Year:

1987

Language:

english

File:

PDF, 837 KB

english, 1987

30

Handbook of Maize || Databases and Data Mining

Bennetzen, Jeffrey L., Hake, Sarah

Year:

2009

Language:

english

File:

PDF, 548 KB

english, 2009

31

Isolation and bioinformatic analysis of a novel transposable element, ISCbe4, from the hyperthermophilic bacterium,Caldicellulosiruptor bescii

Cha, Minseok, Wang, Hao, Chung, Daehwan, Bennetzen, Jeffrey L., Westpheling, Janet

Journal:

Journal of Industrial Microbiology & Biotechnology

Year:

2013

Language:

english

File:

PDF, 660 KB

english, 2013

32

Current status and prospects for the study ofNicotianagenomics, genetics, and nicotine biosynthesis genes

Wang, Xuewen, Bennetzen, Jeffrey L.

Journal:

Molecular Genetics and Genomics

Year:

2015

Language:

english

File:

PDF, 397 KB

english, 2015

33

Evidence that a Recent Increase in Maize Genome Size was Caused by the Massive Amplification of Intergene Retrotransposons

PHILLIP SANMIGUEL, JEFFREY L. BENNETZEN

Journal:

Annals of Botany

Year:

1998

Language:

english

File:

PDF, 214 KB

english, 1998

34

A Gene Family Derived from Transposable Elements during Early Angiosperm Evolution Has Reproductive Fitness Benefits in Arabidopsis thaliana

Joly-Lopez, Zoé, Forczek, Ewa, Hoen, Douglas R., Juretic, Nikoleta, Bureau, Thomas E., Bennetzen, Jeffrey L.

Journal:

Year:

2012

Language:

english

File:

PDF, 3.55 MB

english, 2012

35

The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes

James C Estill, Jeffrey L Bennetzen

Journal:

Year:

2009

Language:

english

File:

PDF, 962 KB

english, 2009

36

Genetic Mapping and Characterization of Sorghum and Related Crops by Means of Maize DNA Probes

Scot H. Hulbert, Todd E. Richter, John D. Axtell and Jeffrey L. Bennetzen

Journal:

Proceedings of the National Academy of Sciences

Year:

1990

Language:

english

File:

PDF, 1.21 MB

english, 1990

37

Discovery of Lineage-Specific Genome Change in Rice Through Analysis of Resequencing Data

Arthur, Robert A., Bennetzen, Jeffrey L.

Journal:

Year:

2018

Language:

english

File:

PDF, 693 KB

english, 2018

38

Gene Content and Distribution in the Nuclear Genome of Fragaria vesca

Pontaroli, Ana Clara, Rogers, Rebekah L., Zhang, Qian, Shields, Melanie E., Davis, Thomas M., Folta, Kevin M., SanMiguel, Phillip, Bennetzen, Jeffrey L.

Journal:

The Plant Genome

Year:

2009

Language:

english

File:

PDF, 656 KB

english, 2009

39

Lateral transfers of large DNA fragments spread functional genes among grasses

Dunning, Luke T., Olofsson, Jill K., Parisod, Christian, Choudhury, Rimjhim Roy, Moreno-Villena, Jose J., Yang, Yang, Dionora, Jacqueline, Quick, W. Paul, Park, Minkyu, Bennetzen, Jeffrey L., Besnard,

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

File:

PDF, 2.54 MB

2019

40

Regulatory mutants of the maize Adh1 gene caused by DNA insertions

Strommer, Judith N., Hake, Sarah, Bennetzen, Jeffrey, Taylor, William C., Freeling, Michael

Journal:

Year:

1982

File:

PDF, 394 KB

1982

41

Handbook of Maize || Cytogenetics and Chromosomal Structural Diversity

Bennetzen, Jeffrey L., Hake, Sarah

Year:

2009

Language:

english

File:

PDF, 109 KB

english, 2009

42

Structural Domains and Matrix Attachment Regions along Colinear Chromosomal Segments of Maize and Sorghum

Alexander P. Tikhonov, Jeffrey L. Bennetzen and Zoya V. Avramova

Journal:

Year:

2000

Language:

english

File:

PDF, 2.48 MB

english, 2000

43

Teff, an Orphan Cereal in the Chloridoideae , Provides Insights into the Evolution of Storage Proteins in Grasses

Zhang, Wei, Xu, Jianhong, Bennetzen, Jeffrey L., Messing, Joachim

Journal:

Genome Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 5.90 MB

english, 2016

44

[Compendium of Plant Genomes] The Maize Genome ||

Bennetzen, Jeffrey, Flint-Garcia, Sherry, Hirsch, Candice, Tuberosa, Roberto

Year:

2018

Language:

english

File:

PDF, 8.79 MB

english, 2018

45

Assessment of genetic diversity in dent and popcorn (Zea maysL.) inbred lines using inter-simple sequence repeat (ISSR) amplification

Ramesh V. Kantety, Xiaoping Zeng, Jeffrey L. Bennetzen, Brent E. Zehr

Journal:

Molecular Breeding

Year:

1995

Language:

english

File:

PDF, 962 KB

english, 1995

46

Handbook of Maize Volume 485 || Imprinting in Maize

Bennetzen, Jeffrey L., Hake, Sarah

Year:

2009

Language:

english

File:

PDF, 137 KB

english, 2009

47

[Compendium of Plant Genomes] The Maize Genome || Genomics of Nitrogen Use Efficiency in Maize: From Basic Approaches to Agronomic Applications

Bennetzen, Jeffrey, Flint-Garcia, Sherry, Hirsch, Candice, Tuberosa, Roberto

Year:

2018

Language:

english

File:

PDF, 689 KB

english, 2018

48

Analysis of the chromosomal distribution of transposon-carrying T-DNAs in tomato using the inverse polymerase chain reaction

Colwyn M. Thomas, David A. Jones, James J. English, Bernard J. Carroll, Jeffrey L. Bennetzen, Kate Harrison, Alan Burbidge, Gerard J. Bishop, Jonathan D. G. Jones

Journal:

Molecular Genetics and Genomics

Year:

1994

Language:

english

File:

PDF, 2.00 MB

english, 1994

49

Isolation of the structural gene for alcohol dehydrogenase by genetic complementation in yeast

Williamson, Valerie M., Bennetzen, Jeffrey, Young, Elton T., Nasmyth, Kim, Hall, Benjamin D.

Journal:

Year:

1980

File:

PDF, 429 KB

1980

50

10.1038/83726

Bennetzen, Jeffrey L

Journal:

Nature Genetics

Year:

2001

Language:

english

File:

PDF, 377 KB

english, 2001

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